The palladium-catalyzed cross-coupling reaction of carboxylic anhydrides with arylboronic acids: a DFT study

The mechanism of the cross-coupling of phenylboronic acid with acetic anhydride, a viable model of the widely used Suzuki reaction, has been studied by DFT calculations at the BP86/6-31G level of theory. Two alternative catalytic cycles have been investigated, one starting from a neutral Pd(0)L(2) complex, the other from an anionic "Jutand-type" [Pd(0)L(2)X](-) species. The reaction profiles are in good agreement with the experimental findings, as both pathways require only moderate activation energies. Both pathways are dominated by cis-configured square-planar palladium(II)diphosphine intermediates. Despite careful investigations, we did not find in this model reaction any evidence for five-coordinate palladium(II) intermediates, which are commonly believed to cause the profound effects of counterions in palladium-catalyzed transformations. Instead, our calculations suggest that the higher catalytic activity of anionic complexes, such as [Pd(PMe(3))(2)OAc](-), may arise from their stronger ability to coordinate to carbon electrophiles. The transmetalation sequence is the same for both catalytic cycles, involving the dissociation of one phosphine ligand from the palladium. In the decisive transition state, in which the phenyl group is transferred from boron to palladium, the acetate base is found to be in a bridging coordination between these two atoms.     

Optical decoherence and persistent spectral hole burning in Er:LiNbO3

Developing new resonant optical materials for spatial-spectral holography and quantum information applications requires detailed knowledge of the decoherence and population relaxation dynamics for the quantum states involved in the optical transitions, motivating the need for fundamental material studies. We report recent progress in studying these properties in erbium-doped lithium niobate at liquid helium temperatures. The influence of temperature, applied magnetic fields, measurement timescale, and dopant concentration were probed using photon echo spectroscopy and time-resolved spectral hole burning on the 1532 nm transition of Er³⁺:LiNbO₃. Effects of spectral diffusion due to interactions between Er³⁺ ions and between the Er³⁺ ion and ⁷Li and ⁹³Nb nuclear spins in the host lattice were observed. In addition, long-lived persistent spectral storage of seconds to minutes was observed due to non-equilibrium population redistribution among superhyperfine states.     

QM/MM study of the taxadiene synthase mechanism

Combined quantum mechanics/molecular mechanics (QM/MM) calculations were used to investigate the reaction mechanism of taxadiene synthase (TXS). TXS catalyzes the cyclization of geranylgeranyl diphosphate (GGPP) to taxadiene (T) and four minor cyclic products. All these products originate from the deprotonation of carbocation intermediates. The reaction profiles for the conversion of GGPP to T as well as to minor products were calculated for different configurations of relevant TXS carbocation complexes. The QM region was treated at the M06-2X/TZVP level, while the CHARMM27 force field was used to describe the MM region. The QM/MM calculations suggest a reaction pathway for the conversion of GGPP to T, which slightly differs from previous proposals regarding the number of reaction steps and the conformation of the carbocations. The QM/MM results also indicate that the formation of minor products via water-assisted deprotonation of the carbocations is highly exothermic, by about −7 to −23 kcal/mol. Curiously, however, the computed barriers and reaction energies indicate that the formation of some of the minor products is more facile than the formation of T. Thus, the present QM/MM calculations provide detailed insights into possible reaction pathways and into the origin of the promiscuity of TXS, but they do not reproduce the product distribution observed experimentally. © 2019 Wiley Periodicals, Inc.     

Kinetics of facile bilayer island formation at low temperature: Ag/NiAl(110)

Facile nucleation and growth of bilayer Ag(110) islands on NiAl(110) is observed by STM for Ag deposition at temperatures as low as 127 K. Density functional theory analysis for supported Ag films determines adatom adsorption energies (which favor bilayer islands), interaction energies, and diffusion barriers. Analysis of an atomistic lattice-gas model incorporating these energies elucidates the role of strongly anisotropic interactions in enabling the upward mass transport needed for bilayer island formation.     

Control of reaction mechanisms in cationically polymerized epoxy resins facilitates the adjustment of morphology and mechanical properties

Structure–property relations of cationically polymerized epoxy thermosets with different morphologies are examined. The morphology adjustment of amorphous epoxy based copolymers and partially crystalline polymer alloys is carried out with star‐shaped poly(ε‐caprolactone) (SPCL) bearing various numbers of hydroxyl end groups. These hydroxyl groups are known for their reactivity toward epoxides following the activated monomer (AM) mechanism. For this reason, four‐armed SPCL was synthesized with four hydroxyl end groups (SPCL‐tetraol) and, in addition, with successively esterified ones down to a SPCL with four ester end groups (SPCL‐tetraester). SPCL species bearing fewer or no hydroxyl end groups segregate into needle‐like nanodomains within the epoxy networks and, if the concentration is high enough, also into crystalline domains. The stronger phase separation of SPCL‐tetraester within the epoxy network compared with SPCL‐tetraol is due to a reduction of the AM mechanism. The mechanical properties resulting from different morphologies lead to a trade‐off between higher storage moduli and T_g values in the case of the more phase separated (and partially crystalline) polymer alloys and higher strain at break in the case of the amorphous copolymers. Nevertheless, in both cases toughness is improved or at least kept on the same level as for the pure epoxy resin. © 2016 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2016 , 54, 2188–2199